Saturday, May 18, 2019

ppim running, sl_mu not...

MC update: ppim MC is (mostly) completing on the cluster, though wall time is still much larger than CPU time.  Not sure what the issue is, but am nearly done with ppim MC.  Will take a look at it this week.

sl_mu MC is NOT running.  err files look like this

ls -lWarning from GlueXDetectorConstruction::ConstructSDandField - unsupported sensitive volume TAC1 found in geometry definiti\
on.
G4WT0 > Warning from GlueXDetectorConstruction::ConstructSDandField - unsupported sensitive volume TAC1 found in geometry defin\
ition.
JANA ERROR>>thread 0 has stalled on run:31000 event:101900001
JANA ERROR>> Thread 0 (7f4082a8c700) hasn't responded in 31 seconds. (run:event=31000:101900001) Cancelling ...
JANA ERROR>> Caught HUP signal for thread 0x7f4082a8c700 thread exiting...
JANA ERROR>>
JANA ERROR>> Last thread to lock output file mutex: 0x7f4082a8c700
JANA ERROR>> Attempting to unlock mutex to avoid deadlock.
JANA ERROR>> However, the output file is likely corrupt at
JANA ERROR>> this point and the process should be restarted ...
JANA ERROR>>
JANA ERROR>>
JANA ERROR>> Automatic relaunching of threads is disabled. If you wish to
JANA ERROR>> have the program relaunch a replacement thread when a stalled
JANA ERROR>> one is killed, set the JANA:MAX_RELAUNCH_THREADS configuration
JANA ERROR>> parameter to a value greater than zero. E.g.:
JANA ERROR>>
JANA ERROR>>     jana -PJANA:MAX_RELAUNCH_THREADS=10
JANA ERROR>>
JANA ERROR>> The program will quit now.
cat: /usr/local/etc/motd: No such file or directory
stty: standard input: Inappropriate ioctl for device
/var/spool/torque-4.2.7/mom_priv/jobs/51868478.farmpbs14.SC: line 49:   999 Terminated              nice -n 5 /scratch/auger/$J\
OB_ID/command.sh >> $WORK_DIR/job.out 2>> $WORK_DIR/job.err
=>> PBS: job killed: walltime 86443 exceeded limit 86400
Looking at the output file, looks like hdgeant4 is running and exiting OK, but mcsmear is writing 0 events to the hddm file. Going to submit a few more MC runs with an extra ls in them to sort this out.


 

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